PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy011902
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GRAS
Protein Properties Length: 408aa    MW: 45906.6 Da    PI: 5.241
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59545588PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS78.61.1e-241404087270
       GRAS   7 ecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIlea 105
                ++ ea+++++++la+++L  +s+  sp      +Rl +y+  A aa   +        l+ ++      +++ aa+++f++ +P+ kf+h++a +aI e 
  Ahy011902 140 AIGEALENRHKALAEEILRCISNKLSPLSqIVDERLHFYMSLATAANNGD-------YLKGEA-----LKNSDAAFRAFYQGTPFGKFAHFVALSAIIEN 227
                45567777777777777777777766666246677777776555444333.......222222.....3344457799********************** PP

       GRAS 106 vege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg........skeeleetgerLakfAeelgvpfefnvlvakrledleleeL.r 195
                +  + ++vH++D  ++ G+QW+++++a+a R+    ++++T ++s +++             eet++ L + A++ g++++ +    k +e+l ++eL +
  Ahy011902 228 MPPDcDAVHVVDSYMGIGIQWIPMIEAMARRNIT--QFKLTSISSGHHQqghdgnstTPWISEETKRHLYEHARSWGLNLKVEE---KGIEEL-VSELkN 321
                *9777*************************9755..9******99776677888754444579*****************9887...788888.666624 PP

       GRAS 196 vkp......gEalaVnlvlqlhrlldesvsleserdevLklvksl.....sPkvvvvveqe..adh.nsesFlerflealeyysalfds 270
                vk+      +E la n++l+l ++ ++s   +    e+Lkl k+l     +  ++++ + +   ++ +s +F + f   l +y al++s
  Ahy011902 322 VKKsggsgiKEFLAFNCMLNLPHMANRSSRKQ--AMEFLKLAKDLingsgNKGIITFGDGDafEKLkTSMNFKAFFDGHLVHYHALMES 408
                555889999***************95554444..59*******9965555567899998884323357778888888888888888886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098519.778108408IPR005202Transcription factor GRAS
PfamPF035143.9E-22140408IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MMQSNEILQS PSSLFDEPYY YYGLSSMDED GDDYGFSAIF NTCSSENTIF TNEYDHHIQY  60
TIDDETLQLQ PLIHDFPMKF HDLTHQFLES EGSIIPSQEA YSPTQSFNSD MSSSSSTPLN  120
LPQPNTQIEN HLILPHLVDA IGEALENRHK ALAEEILRCI SNKLSPLSQI VDERLHFYMS  180
LATAANNGDY LKGEALKNSD AAFRAFYQGT PFGKFAHFVA LSAIIENMPP DCDAVHVVDS  240
YMGIGIQWIP MIEAMARRNI TQFKLTSISS GHHQQGHDGN STTPWISEET KRHLYEHARS  300
WGLNLKVEEK GIEELVSELK NVKKSGGSGI KEFLAFNCML NLPHMANRSS RKQAMEFLKL  360
AKDLINGSGN KGIITFGDGD AFEKLKTSMN FKAFFDGHLV HYHALMES
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016195899.10.0PREDICTED: nodulation-signaling pathway 2 protein-like
TrEMBLA0A0S3RU111e-123A0A0S3RU11_PHAAN; Uncharacterized protein
TrEMBLA0A0L9U3V41e-123A0A0L9U3V4_PHAAN; Uncharacterized protein
STRINGGLYMA18G43580.11e-119(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.17e-12GRAS family protein